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| Position | Top player | Team ranking | Top prospect | Organizational ranking | Overall ranking |
|---|---|---|---|---|---|
| Catchers | Mal Bussard | 5th | Russell Jackson | Tied for 1st | 5th |
| First Basemen | Chris Smith | 2nd | Edgar Carrillo | Tied for 1st | 2nd |
| Second Basemen | Nathan Horton | 1st | Hubert Dodson | Tied for 1st | 1st |
| Third Basemen | 7th | Javier Hernández | Tied for 1st | 7th | |
| Shortstops | Nate Cates | 3rd | Joe Runyon | Tied for 1st | 3rd |
| Left Fielders | Armando Esparza | 1st | Calvin Fleming | Tied for 1st | 1st |
| Center Fielders | Leandro Tuzzi | 6th | Bernardo Elías | Tied for 1st | 6th |
| Right Fielders | 9th | Monty Sharp | Tied for 1st | 9th | |
| Starting Pitchers | Christian Pitts | 5th | Lorenzo Sánchez | Tied for 1st | 5th |
| Relievers | Brandon Bannatyne | 2nd | José Guerrero | Tied for 1st | 2nd |
| Closers | Rick Payne | 2nd | Lewis Miller | Tied for 1st | 2nd |
