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| Position | Top player | Team ranking | Top prospect | Organizational ranking | Overall ranking |
|---|---|---|---|---|---|
| Catchers | Mark Roy | 49th | Tied for 21st | 53rd | |
| First Basemen | Mark Wilson | 53rd | Tied for 17th | 55th | |
| Second Basemen | Miguel Vega | 71st | Tied for 24th | 71st | |
| Third Basemen | Ken Miller | 32nd | Tied for 20th | 36th | |
| Shortstops | Carl Murphy | Tied for 13th | Carl Murphy | 17th | 25th |
| Left Fielders | Myron Reynolds | 47th | Dustin Jones | 6th | 11th |
| Center Fielders | Bob Casey | 37th | Tied for 23rd | 42nd | |
| Right Fielders | Anthony McBride | 46th | Anthony McBride | Tied for 5th | 10th |
| Starting Pitchers | Jean-François Wong | 24th | Tied for 53rd | 43rd | |
| Relievers | Mike Graham | 59th | Tied for 8th | 59th | |
| Closers | Manny Marte | Tied for 22nd | Tied for 11th | Tied for 27th |
